Nakamurella leprariae sp. nov., isolated from a lichen sample
- Author:
- An D.-F., Yang S.-J., Jiang L.-Q., Wang X.-Y., Huang X.-Y., Lang L., Chen X.-M, Fan M.-Q., Li G.-D., Jiang M.-G., Wang L.-S., Jiang C.-L. & Jiang Y.
- Year:
- 2022
- Journal:
- Archives of Microbiology
- Pages:
- 204: 19 [7 p.]
- Url:
- https://doi.org/10.1007/s00203-021-02626-7
A novel actinobacterium, YIM 132084T,
was isolated from Lepraria sp. lichen collected from Yunnan province, south-west
PR China and identified by a polyphasic taxonomic approach. The strain was Gram-stain-positive, aerobic, catalase-positive,
oxidase-negative, non-motile and coccus-shaped. Colonies were round, convex, smooth and light orange yellow in color.
It grew at 10–40 °C (optimum 28 °C), at pH 6.0–11.0 (optimum pH 7.0) and in the presence of 0–4% NaCl (optimum 0%).
Strain YIM 132084T
comprised diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylinositol as the major
polar lipids, MK-8(H4) as the predominant menaquinone, and anteiso-C15:0, anteiso-C17:0, iso-C15:0 and iso-C16:0 as major fatty
acids. Strain YIM 132084T
had meso-diaminopimelic acid as the diagnostic diamino acid in the cell-wall peptidoglycan, and
mannose, ribose, glucose and rhamnose as whole-cell sugars. The 16S rRNA gene sequence showed high level of similarity
with Nakamurella flavida KCTC 19127T
(97.7%) and Nakamurella flava CGMCC 4.7524T (97.7%). The G + C content of
the genomic DNA was 72.4 mol%. Based on draft genome sequences, strain YIM 132084T
showed an average nucleotide
identity value of 76.1% and 74.9%, a digital DNA–DNA hybridization value of 20.9% and 20.6% with the reference strains
Nakamurella flavida and Nakamurella flava, respectively. The results of the phenotypic, chemotaxonomic and phylogenetic
analyses showed that strain YIM 132084T
represents a novel species of the genus Nakamurella, for which the name Nakamurella
leprariae sp. nov. is proposed. The type strain is YIM 132084T
(= CGMCC 4.7667T = NBRC 114280T
= KCTC
49367T).
Keywords: Nakamurella · Nakamurella leprariae sp. nov. · Polyphasic taxonomy · Lichen.
- Id:
- 33998
- Submitter:
- zdenek
- Post_time:
- Friday, 17 December 2021 23:58